COBRApy is a package for constraint-based modeling of metabolic networks.
Chemical reaction network and systems biology interface for scientific m...
Curated (meta)list of resources for Biology.
python Parameter EStimation TOolbox
:gem: An easy-to-use workflow for generating context specific genome-sca...
INDRA (Integrated Network and Dynamical Reasoning Assembler) is an autom...
🌶️ An ecosystem in Python for working with the Biological Expression Lan...
General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
Automated generation of tailored bioinformatics Jupyter Notebooks via a ...
A Python framework for structural systems biology
The RAVEN Toolbox for genome scale model reconstruction, curation and an...
The consensus GEM for Saccharomyces cerevisiae
COPASI is a software application for simulation and analysis of biochemi...
Python package to study microbial communities using metabolic modeling.
For finding, sharing and exchanging Data, Models, Simulations and Proces...