An integrated software environment for multi-algorithm, multi-timescale,...
Toolbox for including enzyme constraints on a genome-scale model.
a modeling environment tailored to parameter estimation in dynamical sys...
PathwayMapper: An interactive and collaborative graphical curation tool ...
PEtab - an SBML and TSV based data format for parameter estimation probl...
CellMLToolkit.jl is a Julia library that connects CellML models to the S...
Workshop in omics integration and systems biology
A web application to visualize and edit pathway models
An interactive web portal for exploring immuno-oncology data. This repo...
An integrated visual environment for metabolic modeling with common meth...
Fast stochastic simulator for chemical reaction networks
StochPy is a versatile stochastic modeling package which is designed for...
JSBML is a community-driven project to create a free, open-source, pure ...
A web based visualization tool for process description maps in SBGN
A COBRApy extension for genome-scale models of metabolism and expression...