Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets
Cluster single cells and analyze cell clade relationships with colorful ...
scDeepCluster for Single Cell RNA-seq data
A Shiny web app for mapping datasets using Seurat v4
HMM-integrated Bayesian approach for detecting CNV and LOH events from s...
Single-cell disease relevance score (scDRS)
Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scA...
Accurate and robust imputation of scRNA-seq data
A tool for unsupervised projection of single cell RNA-seq data
Single-Cell Clustering Assessment Framework
Pipeline for initial analysis of droplet-based single-cell RNA-seq data
integrated RNA-seq Analysis Pipeline
A BLAST-like toolkit for large-scale scRNA-seq data querying and annotat...
:hibiscus: reference-free transcriptome assembly for short and long reads
A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction