R package with collection of functions created and/or curated to aid in ...
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing sin...
Haplotype-aware CNV analysis from single-cell RNA-seq
Seurat meets tidyverse. The best of both worlds.
A wrapper for the kallisto | bustools workflow for single-cell RNA-seq p...
A Bayesian model for compositional single-cell data analysis
Interfaces for HDF5-based Single Cell File Formats
Generate high quality, publication ready visualizations for single cell ...
LIANA+: an all-in-one framework for cell-cell communication
A tool for the unsupervised clustering of cells from single cell RNA-Seq...
A collection of 50+ trajectory inference methods within a common interfa...
Tutorial for scRNA-seq data analysis beginners using R
Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizi...
Metacell - Single-cell mRNA Analysis