Structural variation caller using third generation sequencing
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
Sequence correction provided by ONT Research
Oxford Nanopore's Basecaller
A PyTorch Basecaller for Oxford Nanopore Reads
[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopo...
pycoQC computes metrics and generates Interactive QC plots from the sequ...
PEPPER-Margin-DeepVariant
Long read / genome alignment software
Clair3 - Symphonizing pileup and full-alignment for high-performance lon...
A curated list of awesome nanopore analysis tools.
A collection of scripts and notes related to genomics and bioinformatics
Assembly and binning of metagenomes
A high performance and compression ratio compressor for genomic data, po...
Reference-guided transcript discovery and quantification for long read R...