Versatile open-source tool for microbiome analysis
Accurate sample inference from amplicon data with single nucleotide reso...
Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has s...
microbiome R package
Distilled and Refined Annotation of Metabolism: A tool for the annotatio...
:gem: An easy-to-use workflow for generating context specific genome-sca...
R package for microbiome biomarker discovery
:microbe: A comprehensive R package for deep mining microbiome
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Human Microbiome wiki
Simple statistical identification and removal of contaminants in marker-...
A robust and fast clustering method for amplicon-based studies
MaAsLin2: Microbiome Multivariate Association with Linear Models
Current Challenges and Best Practice Protocols for Microbiome Analysis u...
Differential abundance (DA) and correlation analyses for microbial absol...