A collection of tools for Hi-C data analysis
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Customizable workflows based on snakemake and python for the analysis of...
Fast, flexible and extensible genome browser.
A cool place to store your Hi-C
Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-...
A (continuously updated) collection of references to Hi-C data. Predomin...
Accurate and flexible loops calling tool for 3D genomic data.
TADbit is a complete Python library to deal with all steps to analyze, m...
TAD calling, phase imputation, 3D modeling and more for diploid single-c...
flexible suite of CLI tools for contact extraction (.pairs) from sequenc...
1D/2D indexing and querying on bgzipped text file with a pair of genomic...
A modular Hi-C mapping pipeline
HapHiC: a fast, reference-independent, allele-aware scaffolding tool bas...
Analysis of Chromosome Conformation Capture data (Hi-C)