The Refinery Platform is a data management, analysis and visualization system for bioinformatics and computational biology applications. The platforms consists of three major components: a data repository with rich metadata capabilities, a workflow engine based on the popular Galaxy system, and visualization tools to support the exploration and interpretation of results at all stages of the analysis process.
Command to be run on deployment:
./manage.py load_tools --visualizations igv --force
Implemented enhancements:
Fixed bugs:
Closed issues:
Merged pull requests:
Implemented enhancements:
Fixed bugs:
Closed issues:
Merged pull requests:
Hotfix release to update PostgreSQL package to v10.8
Implemented enhancements:
Fixed bugs:
Closed issues:
Merged pull requests:
Commands to run:
./manage.py ebs_to_s3
./manage.py update_index
./manage.py load_tools --workflows --force
Implemented enhancements:
Fixed bugs:
Closed issues:
Merged pull requests:
Note: This release upgraded the version of PostgreSQL being used from 9.3.x to 10.x. The steps required to deploy a production instance with these changes can be found here
Implemented enhancements:
Fixed bugs:
Closed issues:
Merged pull requests:
This hotfix release resolves a bug in the events api caused by a str casting.
This is a hotfix release solely to get a larger EC2 instance type for our docker host running our VisualizationTools
NOTE:
Will need to run the following to update the Solr index and add theintervene
visualization tool, respectively:
./manage.py update_index
./manage.py load_tools --visualizations intervene
Implemented enhancements:
auxiliary\_file\_generation\_task\_state
#1484
Fixed bugs:
Closed issues:
?
popover shows ui artifact on hover #2526
Merged pull requests: