Recycler Versions Save

This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir

v0.7

6 years ago

Updates to bring in line with NetworkX 2 and SPAdes 3.11.

Updates to tests.

v0.62

7 years ago

installation bug-fix curtesy of @shenwei356

v0.61

7 years ago

Release incorporating push from druvus.

v0.5

8 years ago

This release was used in testing and validation for the Recycler preprint.

Recycler-v0.6

8 years ago
  • Added BAM-based filtering mechanism
  • Separated isolate and microbiome cases
  • Added nose tests, refactored
  • Updated and expanded README