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Pyfastx Versions
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a python package for fast random access to sequences from plain and gzipped FASTA/Q files
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2.1.0
2 months ago
Added support for Python 3.12
Fixed fasta sequence composition error ( #77 )
Fixed fastq continuous reading error ( #75 #78 )
2.0.2
5 months ago
Fixed subsequence return None error ( #76 )
2.0.1
8 months ago
Speedup the gzip index writing to index file
2.0.0
8 months ago
Added support for file name with wide char ( #66 )
Added support for specifying index file path ( #45 )
Added support for more characters in DNA sequence
Added reverse complement function for DNA conversion ( #69 )
Improved the performance of kseq library ( #68 )
Optimized gzip index importing and saving without temp file
Fixed segmentation fault when using sequence composition ( #67 )
Fixed memory leak in Fastq read quality integer ( #70 )
Fixed zlib download url broken error when building
1.1.0
1 year ago
Fixed unicode error when reading fastq file
1.0.1
1 year ago
Fixed invalid uppercase when iterating fastx
1.0.0
1 year ago
Added support for fasta header without space ( #62 #58 )
Fixed some files missing in pypi tar.gz file ( #60 )
0.9.1
1 year ago
Fixed unicode decode error when parsing large fasta/q file ( #39 #56 )
Fixed sequence retrival error when using sequence object from loop after break ( #43 )
0.9.0
1 year ago
Added support for Python3.10, 3.11
Added support for aarch64 and musllinux ( #34 )
Added using tab as fasta sequence name splitter
Fixed repeat sequence comment error ( #37 #49 )
Fixed the quality score parsing error from fastq ( #44 )
Fixed the reference of sequence returned from function ( #36 )
0.8.4
2 years ago
Added slice feature to FastaKeys ( #31 )
Fixed FastaKeys and FastqKeys iteration memory leak ( #32 )
Optimized FastaKeys and FastqKeys creation
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