Python wrapper for the PubChem PUG REST API.
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PubChemPy provides a way to interact with PubChem in Python. It allows chemical searches by name, substructure and similarity, chemical standardization, conversion between chemical file formats, depiction and retrieval of chemical properties.
.. code:: python
>>> from pubchempy import get_compounds, Compound
>>> comp = Compound.from_cid(1423)
>>> print(comp.isomeric_smiles)
CCCCCCCNC1CCCC1CCCCCCC(=O)O
>>> comps = get_compounds('Aspirin', 'name')
>>> print(comps[0].xlogp)
1.2
Install PubChemPy using:
::
pip install pubchempy
Alternatively, try one of the other installation options
_.
Full documentation is available at http://pubchempy.readthedocs.io.
Issue Tracker
_.source code
_ on GitHub, make changes and file a pull request.PubChemPy is licensed under the MIT license
_.
.. _installation options
: http://pubchempy.readthedocs.io/en/latest/guide/install.html
.. _source code
: https://github.com/mcs07/PubChemPy
.. _Issue Tracker
: https://github.com/mcs07/PubChemPy/issues
.. _MIT license
: https://github.com/mcs07/PubChemPy/blob/master/LICENSE