The open-source version of PhenoTips is no longer maintained. PhenoTips makes it simple to record clinical findings observed in patients with possible genetic disorders through an easy-to-use Web interface
The open-source, XWiki version of the PhenoTips platform is no longer actively developed or maintained.
PhenoTips development is now focused on the closed-source Enterprise solution available at phenotips.com.
PhenoTips is a browser-based tool for recording linked clinical phenotype, genetic, disease, and family history data for patients with genetic diseases. PhenoTips includes a highly-customizable patient form, and includes sections to enter:
You use PhenoTips directly through your web browser.
localhost:8080
This project uses Apache Maven for lifecycle management.
First set up your environment:
git clone [email protected]:phenotips/phenotips.git
export MAVEN_OPTS="-Xmx2g -XX:MaxPermSize=256m"
Then, build the project with:
cd phenotips/
mvn install
Note: the first build may take a long time because all the dependencies are downloaded, but subsequent builds should only take a few minutes
The project is split into several modules, among which distribution/standalone
will result in a fully-working self-contained package ready to run. Running the application is as simple as:
mvn install
, as stated above, to build the projectdistribution/standalone/target
phenotips-standalone-<version>.zip
archive to a location of your choice (outside the target
directory, to ensure it is not overwritten by subsequent builds)start
script (start.sh
on unix-like systems, start.bat
on Windows)Admin
and Password: admin
(case-sensitive)The open-source community version of PhenoTips is no longer maintained or supported.
For information about the Enterprise version, please see phenotips.com.
This open-source version of PhenoTips was distributed under the AGPL version 3 (GNU Affero General Public License), a well known free software/open source license recognized both by the Free Software Foundation and the Open Source Initiative.
You can ensure compliance with this license by:
For more information, please Contact Us.