Lungmask Versions Save

• Keep DICOM metadata if available in the output: '0008|0020', # StudyDate '0008|0030', # StudyTime '0008|0050', # AccessionNumber '0008|0090', # ReferringPhysicianName '0008|1030', # StudyDescription '0010|0010', # PatientName '0010|0020', # PatientID '0010|0030', # PatientBirthDate '0010|0040', # PatientSex '0018|5100', # Patient Position '0020|000d', # StudyInstanceUID '0020|0010' # StudyID
• Deprecated cli options removed (modeltype, number classes, noHU)
• Support for noHU images (jpg, png etc) removed

adds a check if mps submodule is available (should only be necessary in torch<1.12

• adds support for mps (apple metal)

specifies package logger without propagation

• enables to provide weights path to LMInferer class directly
• deprecates apply and apply_fused functions
• deprecates classes parameter in CLI (are now inferred from the weights directly)

• code-cleaning
• unit-tests
• inference class
• docstrings

Fixes a bug in model fusion, and some typos

fixes issue with deprecated np.float type when using new numpy versions

This version introduced model fusing. That is, combining the results of two models