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KGX is a Python library for exchanging Knowledge Graphs
Overview
Versions
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0.5.0
3 years ago
This is the final release on the 0.x.x
Added ability to assign a default category in SssomTransformer when the incoming category is invalid
Added the ability to generate different types of graph summary reports
0.4.0
3 years ago
Fixed a bug in NtTransformer when parsing malformed triples
Added a transformer for parsing SSSOM
Added ability to fold predicates to node properties
Added ability to unfold node properties to predicates
Added ability to remove singleton nodes from a graph
Fixed bug in KGX CLI transform operation that prevented stack trace from showing up
Unified the way predicates are parsed across different transformers
Added ability to annotate edges with OWLStar vocabulary in RdfOwlTransformer
0.3.1
3 years ago
Fixed a bug that led to import errors
Fixed column ordering when exporting CSV/TSV
Added ability to generate a TRAPI knowledge map for a graph
Fixed bug in ObographJsonTransformer when inferring node category
0.3.0
3 years ago
Added Graph API to KGX
Added compatibility to Biolink Model 1.4.0
Added the ability to facet on node and edge properties for graph-summary CLI operation
Fixed a bug where source name defined in YAML was not being used for graph name
0.2.4
3 years ago
Fixed bug when handling empty elements returned from bmt
Fixed bug in CLI when setting property types in RdfTransformer
Fixed bug when reifying edges on export in RdfTransformer
0.2.3
3 years ago
Updated requirements.txt
Added a Dockerfile
0.2.2
3 years ago
Made get_toolkit method configurable
Use proper input format when parsing OWL via CLI
Switched default parsing format from CSV to TSV
Fixed bug with spawning processes when transforming source
Fixed parsing of xrefs from from OBOGraph JSON
0.2.0
3 years ago
Improved clique merge operation and addded support for strict and relaxed mode
Fixed a major bug while merging lists during graph merge operation
Fixed a bug in neo4j-download CLI
Updated the merge and transform YAML format
Added support for parsing and exporting jsonlines
KGX now assigns UUID for edges that don't have and id
Updated documentation
0.1.0
3 years ago
Initial release
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