Kgx Versions Save

KGX is a Python library for exchanging Knowledge Graphs

0.5.0

3 years ago
  • This is the final release on the 0.x.x
  • Added ability to assign a default category in SssomTransformer when the incoming category is invalid
  • Added the ability to generate different types of graph summary reports

0.4.0

3 years ago
  • Fixed a bug in NtTransformer when parsing malformed triples
  • Added a transformer for parsing SSSOM
  • Added ability to fold predicates to node properties
  • Added ability to unfold node properties to predicates
  • Added ability to remove singleton nodes from a graph
  • Fixed bug in KGX CLI transform operation that prevented stack trace from showing up
  • Unified the way predicates are parsed across different transformers
  • Added ability to annotate edges with OWLStar vocabulary in RdfOwlTransformer

0.3.1

3 years ago
  • Fixed a bug that led to import errors
  • Fixed column ordering when exporting CSV/TSV
  • Added ability to generate a TRAPI knowledge map for a graph
  • Fixed bug in ObographJsonTransformer when inferring node category

0.3.0

3 years ago
  • Added Graph API to KGX
  • Added compatibility to Biolink Model 1.4.0
  • Added the ability to facet on node and edge properties for graph-summary CLI operation
  • Fixed a bug where source name defined in YAML was not being used for graph name

0.2.4

3 years ago
  • Fixed bug when handling empty elements returned from bmt
  • Fixed bug in CLI when setting property types in RdfTransformer
  • Fixed bug when reifying edges on export in RdfTransformer

0.2.3

3 years ago
  • Updated requirements.txt
  • Added a Dockerfile

0.2.2

3 years ago
  • Made get_toolkit method configurable
  • Use proper input format when parsing OWL via CLI
  • Switched default parsing format from CSV to TSV
  • Fixed bug with spawning processes when transforming source
  • Fixed parsing of xrefs from from OBOGraph JSON

0.2.0

3 years ago
  • Improved clique merge operation and addded support for strict and relaxed mode
  • Fixed a major bug while merging lists during graph merge operation
  • Fixed a bug in neo4j-download CLI
  • Updated the merge and transform YAML format
  • Added support for parsing and exporting jsonlines
  • KGX now assigns UUID for edges that don't have and id
  • Updated documentation

0.1.0

3 years ago
  • Initial release