GPJax Versions Save

Gaussian processes in JAX.

v0.8.2

2 months ago

What's Changed

add missing jaxopt dependency by @st-- in https://github.com/JaxGaussianProcesses/GPJax/pull/445
Bump to v0.8.2 by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/448

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.8.1...v0.8.2

v0.8.1

2 months ago

What's Changed

Fix broken docs by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/424
Add generic typing information for gps objects by @frazane in https://github.com/JaxGaussianProcesses/GPJax/pull/425
Perhaps finally a decent LBFGS? by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/426
Fix BO notebook by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/430
Clean up intro to kernels notebook by @st-- in https://github.com/JaxGaussianProcesses/GPJax/pull/432
Update intro_to_gps.py by @neel-maniar in https://github.com/JaxGaussianProcesses/GPJax/pull/433
Minor typos in mathematical definitions in intro_to_gps.py by @neel-maniar in https://github.com/JaxGaussianProcesses/GPJax/pull/434
Minor typo in analytic expression for Bayesian evidence in intro_to_g… by @neel-maniar in https://github.com/JaxGaussianProcesses/GPJax/pull/438
Fixed mutable default value error in VelocityKernel and HelmholtzKernel dataclasses in python 3.11 by @wejpurvis in https://github.com/JaxGaussianProcesses/GPJax/pull/439
Update dependencies by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/442
Bump version by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/443

New Contributors

@neel-maniar made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/433
@wejpurvis made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/439

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.8.0...v0.8.1

v0.8.0

5 months ago

Breaking changes

Dropped data masking, multi-output kernels
Namespace paths have changed to full-form i.e., gpx.Prior -> gpx.gps.Prior

What's Changed

Add search space class for BayesOpt by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/355
Add classes for forming acquisition functions by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/359
Add classes for handling posteriors during the decision making loop by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/362
Add logic for running a decision making loop by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/365
Prepare for future batching by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/385
Add decision making functionality by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/386
formatting and spelling by @ivanshalashilin in https://github.com/JaxGaussianProcesses/GPJax/pull/387
Multi output by @ingmarschuster in https://github.com/JaxGaussianProcesses/GPJax/pull/360
Quick fix to remove duplicate file by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/395
Add governance doc by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/398
Fix obs_noise confusion by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/400
bump cola to v0.0.5 by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/405
Jaxopt 2 by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/402
fix config import by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/410
LOOCV objective by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/412
Fix AnalyticalGuassianIntegrator by @meta-inf in https://github.com/JaxGaussianProcesses/GPJax/pull/414
Fix bug and add test. by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/416
Fix typo in CollapsedELBO by @meta-inf in https://github.com/JaxGaussianProcesses/GPJax/pull/417
Bump version by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/411
Cleanup src by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/419
Update README.md by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/418
Update typing.py by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/423
Namespace cleanup by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/408

New Contributors

@meta-inf made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/414

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.7.0...v0.8.0

0.7.3

5 months ago

What's Changed

Jaxopt 2 by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/402
fix config import by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/410
LOOCV objective by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/412
Fix AnalyticalGuassianIntegrator by @meta-inf in https://github.com/JaxGaussianProcesses/GPJax/pull/414
Fix bug and add test. by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/416
Fix typo in CollapsedELBO by @meta-inf in https://github.com/JaxGaussianProcesses/GPJax/pull/417
Bump version by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/411

New Contributors

@meta-inf made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/414

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.7.2...0.7.3

v0.7.2

6 months ago

What's Changed

bump cola to v0.0.5 by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/405

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.7.1...v0.7.2

v0.7.1

7 months ago

What's Changed

Add search space class for BayesOpt by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/355
Add classes for forming acquisition functions by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/359
Add classes for handling posteriors during the decision making loop by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/362
Add logic for running a decision making loop by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/365
Prepare for future batching by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/385
Add decision making functionality by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/386
formatting and spelling by @ivanshalashilin in https://github.com/JaxGaussianProcesses/GPJax/pull/387
Multi output by @ingmarschuster in https://github.com/JaxGaussianProcesses/GPJax/pull/360
Quick fix to remove duplicate file by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/395
Add governance doc by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/398
Fix obs_noise confusion by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/400

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.7.0...v0.7.1

v0.7.0

8 months ago

What's Changed

Benchmarking by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/319
CoLA integration by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/370
Vector Fields Notebook by @ivanshalashilin in https://github.com/JaxGaussianProcesses/GPJax/pull/341

New Contributors

@ivanshalashilin made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/341

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.6.9...v0.7.0

What's Changed

Update README.md by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/250
Bump linkify-it-py from 2.0.0 to 2.0.2 by @dependabot in https://github.com/JaxGaussianProcesses/GPJax/pull/251
Bump JamesIves/github-pages-deploy-action from 4.1.6 to 4.4.1 by @dependabot in https://github.com/JaxGaussianProcesses/GPJax/pull/249
Bump actions/checkout from 2.3.1 to 3.5.2 by @dependabot in https://github.com/JaxGaussianProcesses/GPJax/pull/248
Bump actions/setup-node from 1 to 3 by @dependabot in https://github.com/JaxGaussianProcesses/GPJax/pull/247
Fix latex rending + minor typos. by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/257
Update gpu guide to point to JAX installation guide. by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/258
Tiny doc improvement by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/264
Autogen code by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/265
Update CI by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/266
Add sharp bits doc by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/267
Add isotropy test by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/271
Update sharp_bits.md by @st-- in https://github.com/JaxGaussianProcesses/GPJax/pull/275
Fix doc build by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/281
Bugfix powered_exponential.py by @ingmarschuster in https://github.com/JaxGaussianProcesses/GPJax/pull/279
Static typing fixes by @frazane in https://github.com/JaxGaussianProcesses/GPJax/pull/285
WIP by @henrymoss in https://github.com/JaxGaussianProcesses/GPJax/pull/289
Abstract integrator by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/283
Add cite functionality by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/300
Add integrator/likelihoods doc by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/296
Smoke testing by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/307
Docstring tester by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/317
changed schedule peak_value to 1e-2 for the svgp notebook so it does not give nans by @stefanosele in https://github.com/JaxGaussianProcesses/GPJax/pull/324
Bugfix in BasisFunctionComputation by @frazane in https://github.com/JaxGaussianProcesses/GPJax/pull/326
Decouple kernel computation class initialisation from kernel by @frazane in https://github.com/JaxGaussianProcesses/GPJax/pull/328
Update contribution documentation by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/329
Add introductory kernel notebook and change style file path in notebooks by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/331
Add BO notebook by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/335
Fixed Polar GP example by @trsav in https://github.com/JaxGaussianProcesses/GPJax/pull/339
Merge in main by @ingmarschuster in https://github.com/JaxGaussianProcesses/GPJax/pull/346
Precision check feature by @trsav in https://github.com/JaxGaussianProcesses/GPJax/pull/347
Fix objectives tests by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/348
Categorical kernel by @ingmarschuster in https://github.com/JaxGaussianProcesses/GPJax/pull/345
Clarify docs by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/353
Support for missing values using masked dataset by @frazane in https://github.com/JaxGaussianProcesses/GPJax/pull/340
Bump jax and jaxlib versions by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/366
Fix bug in zero mean function and add test by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/358
Benchmarking by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/319
CoLA integration by @daniel-dodd in https://github.com/JaxGaussianProcesses/GPJax/pull/370
Vector Fields Notebook by @ivanshalashilin in https://github.com/JaxGaussianProcesses/GPJax/pull/341

New Contributors

@dependabot made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/251
@stefanosele made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/324
@trsav made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/339
@ivanshalashilin made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/341

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.6...v0.7.0

v0.6.9

8 months ago

What's Changed

Clarify docs by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/353
Support for missing values using masked dataset by @frazane in https://github.com/JaxGaussianProcesses/GPJax/pull/340
Bump jax and jaxlib versions by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/366
Fix bug in zero mean function and add test by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/358

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.6.8...v0.6.9

v0.6.8

9 months ago

What's Changed

Decouple kernel computation class initialisation from kernel by @frazane in https://github.com/JaxGaussianProcesses/GPJax/pull/328
Update contribution documentation by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/329
Add introductory kernel notebook and change style file path in notebooks by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/331
Add BO notebook by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/335
Fixed Polar GP example by @trsav in https://github.com/JaxGaussianProcesses/GPJax/pull/339
Merge in main by @ingmarschuster in https://github.com/JaxGaussianProcesses/GPJax/pull/346
Precision check feature by @trsav in https://github.com/JaxGaussianProcesses/GPJax/pull/347
Fix objectives tests by @Thomas-Christie in https://github.com/JaxGaussianProcesses/GPJax/pull/348
Categorical kernel by @ingmarschuster in https://github.com/JaxGaussianProcesses/GPJax/pull/345

New Contributors

@Thomas-Christie made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/329
@trsav made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/339

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.6.7...v0.6.8

v0.6.7

10 months ago

What's Changed

Add integrator/likelihoods doc by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/296
Smoke testing by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/307
Docstring tester by @thomaspinder in https://github.com/JaxGaussianProcesses/GPJax/pull/317
changed schedule peak_value to 1e-2 for the svgp notebook so it does not give nans by @stefanosele in https://github.com/JaxGaussianProcesses/GPJax/pull/324
Bugfix in BasisFunctionComputation by @frazane in https://github.com/JaxGaussianProcesses/GPJax/pull/326

New Contributors

@stefanosele made their first contribution in https://github.com/JaxGaussianProcesses/GPJax/pull/324

Full Changelog: https://github.com/JaxGaussianProcesses/GPJax/compare/v0.6.4...v0.6.7