GLM.jl Versions Save

Generalized linear models in Julia

v1.9.0

9 months ago

GLM v1.9.0

Diff since v1.8.2

Merged pull requests:

  • QR decomposition method in GLM. (#507) (@mousum-github)
  • Bump actions/cache from 1 to 3 (#524) (@dependabot[bot])
  • Bump codecov/codecov-action from 1 to 3 (#525) (@dependabot[bot])
  • Bump actions/checkout from 2 to 3 (#526) (@dependabot[bot])
  • bump compat for StatsBase 0.34 (#529) (@palday)
  • Set minimum Julia version to 1.6 (#514) (#530) (@palday)
  • CompatHelper: bump compat for StatsModels to 0.7, (keep existing compat) (#532) (@github-actions[bot])
  • CompatHelper: bump compat for StatsBase to 0.34, (keep existing compat) (#533) (@github-actions[bot])
  • Remove installbeta! and make linear model fit insensitive to beta0 state (#535) (@andreasnoack)
  • set version to 2.0.0-DEV (#536) (@palday)
  • [v1] Allow documentation building on push (#542) (@ararslan)
  • Bump actions/checkout from 3 to 4 (#547) (@dependabot[bot])
  • [G]VIF (#548) (@palday)
  • backport VIF to 1.x release (#549) (@palday)

Closed issues:

  • Add VIF? (#428)
  • Feature request: Support ForwardDiff automatic differentiation (#493)
  • Feature request: Support non-integer dependent variable for Poisson regression (#494)
  • I propose to consider adding precompilation to GLM.jl (#513)
  • Feature request: Support for reuse of pinv computation for multiple Y values in linear models (#534)
  • infinite uninterruptible hang on one illegal input to ftest (#538)
  • Feature Request: Better formats for the GLM outputs (#543)

v1.8.2

1 year ago

GLM v1.8.2

Diff since v1.8.1

Closed issues:

  • GLM fails when Matrix contains a single column (#515)
  • Method 1 and 2 produce different results for the same data (#516)

Merged pull requests:

  • Get rid of TableRegressionModel by storing formula directly in model (#339) (@nalimilan)
  • fix docstring of glm (#506) (@heliosdrm)
  • add compat for statsmodels 0.7 (#512) (@kleinschmidt)
  • Set minimum Julia version to 1.6 (#514) (@ararslan)

v1.8.1

1 year ago

GLM v1.8.1

Diff since v1.8.0

Closed issues:

  • easy printing of fstat (#400)
  • prediction fails on custom vectors (#442)
  • ftest and -0.0 (#461)
  • r2 for GLM (#475)
  • Link doesn't behave like an abstract type (#486)
  • lrtest gives incorrect results (#490)
  • Prediction with confidence intervals not yet implemented for weighted regression (#495)
  • Int conversion in loglik_obs(::Binomial) (#503)

Merged pull requests:

  • Implement nulldeviance and nullloglikelihood for GLMs (#479) (@nalimilan)
  • Readability improvement (#482) (@mousum-github)
  • Implementation of dropcollinear feature in GeneralizedLinearModel (#488) (@mousum-github)
  • Docs: Swap dependent and independent (#497) (@BioTurboNick)
  • ditch negative zero in ftest output (#501) (@palday)
  • autocancel stale CI runs (#502) (@palday)
  • safer int for binomial loglik (#504) (@palday)

v1.8.0

2 years ago

GLM v1.8.0

Diff since v1.7.0

Closed issues:

  • Canonical link for negative binomial distribution (#476)

Merged pull requests:

  • Update the perf script. (#433) (@dmbates)
  • Adding PowerLink link function in GLM (#474) (@ayushpatnaikgit)
  • Fix mention of canonical link for NegativeBinomial (#478) (@nalimilan)
  • Adding geometric distribution for GLM.jl (#480) (@ayushpatnaikgit)
  • CompatHelper: bump compat for "StatsFuns" to "1.0" (#484) (@github-actions[bot])

v1.7.0

2 years ago

GLM v1.7.0

Diff since v1.6.2

Closed issues:

  • Linear models failing to display with ambiguous datatypes with unhelpful error messages (#456)
  • DataFrames dependency error (#472)

Merged pull requests:

  • Fix coeftable for saturated linear models (#458) (@nalimilan)
  • fix predict docstring and remove trailing dim (#467) (@piever)
  • Fixed spelling (#473) (@harsharora21)

v1.6.2

2 years ago

GLM v1.6.2

Diff since v1.6.1

Closed issues:

  • GLM.lm(X, y) fails when X is a SubArray (#213)
  • Stackoverflow with views (#444)
  • Serialising GLM models. (#465)
  • Gamma shape and scale seemingly swapped - where am I going wrong? (#468)
  • cholpred + @view results in MethodError (#470)

Merged pull requests:

  • Improved support for views (#471) (@palday)

v1.6.1

2 years ago

GLM v1.6.1

Diff since v1.6.0

Merged pull requests:

  • Allow for sparse arrays and views (#446) (@andreasnoack)

v1.6.0

2 years ago

GLM v1.6.0

Diff since v1.5.1

Closed issues:

  • License terms incomplete? (#441)
  • Difference between passing data directly or via formula for glm (#450)
  • project.toml version and released versions appear to be out of sync (#463)

Merged pull requests:

  • Implement fstatistic (#424) (@OndrejSlamecka)
  • Add residuals convenience function to docs (#445) (@ym-han)
  • Update license to indicate GPL dependency. (#447) (@rcurtin)
  • Add ftest to the manual (#451) (@nalimilan)
  • Fix manual deployment (#452) (@nalimilan)
  • CompatHelper: bump compat for "SpecialFunctions" to "2.0" (#457) (@github-actions[bot])
  • compat fixes for Julia v1.8 (#459) (@dkarrasch)
  • Update doctests for pivot (#460) (@palday)
  • use StatsModels.isnested instead of defining new issubmodel func (#462) (@kleinschmidt)
  • change version back to 1.6.0 since 1.6.0 was never released (#464) (@kleinschmidt)

v1.5.1

2 years ago

GLM v1.5.1

Diff since v1.5.0

Merged pull requests:

  • use StatsModels.formula (#440) (@palday)

v1.5.0

2 years ago

GLM v1.5.0

Diff since v1.4.2

Closed issues:

  • buggy deprecation for :confint interval (#408)
  • canonicallink(NegativeBinomial()) doesn't give LogLink? (#418)
  • predict() gives wrong results when dropcollinear = true (#431)

Merged pull requests:

  • Improve docs (#382) (@nalimilan)
  • Fix deprecation of predict(..., interval=:confint) (#412) (@nalimilan)
  • Cooks Distance tests (#415) (@ericqu)
  • Re-add precision about NegativeBinomialLink to manual (#419) (@nalimilan)
  • Add ftest to manual (#422) (@OndrejSlamecka)
  • CompatHelper: bump compat for "Distributions" to "0.25" (#429) (@github-actions[bot])
  • Use StableRNG for testing (#434) (@andreasnoack)
  • Fix more predict confidence intervals when dropcollinear=true (#436) (@nalimilan)
  • Fix GitHub Actions arch (#437) (@nalimilan)
  • Throw an error in predict with intervals for rank-deficient models (#438) (@nalimilan)
  • Bump version to 1.5.0 (#439) (@nalimilan)