Facemap Versions Save

Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.

v1.0.6

5 months ago

What's Changed

Bug fixes from github issues posted by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/132
Fix issue #127 by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/133
Fix svd bug and remove numba warnings by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/134

Full Changelog: https://github.com/MouseLand/facemap/compare/v1.0.5...v1.0.6

v1.0.5

6 months ago

What's Changed

Update running.py by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/129
Update README.md by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/130

Full Changelog: https://github.com/MouseLand/facemap/compare/v1.0.4...v1.0.5

v1.0.4

7 months ago

What's Changed

Change to qtpy/pyqt6 by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/125
update tox by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/126

Full Changelog: https://github.com/MouseLand/facemap/compare/v1.0.3...v1.0.4

v1.0.3

8 months ago

What's Changed

Change display layout by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/122
Fix import bug and linter by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/123

Full Changelog: https://github.com/MouseLand/facemap/compare/v1.0.2...v1.0.3

v1.0.2

8 months ago

What's Changed

Colab notebooks and tutorials by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/110
Add tutorials/colab notebooks to readthedocs by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/111
Merge main to dev by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/112
Update readthedocs by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/113
Remove nbsphinx to resolve readthedocs error by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/114
Dev by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/115
Add colab notebooks to readthedocs by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/116
Update readme by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/117
Update window size, help windows and readthedocs by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/120

Full Changelog: https://github.com/MouseLand/facemap/compare/v1.0.1...v1.0.2

v1.0.2-rc1

9 months ago

What's Changed

Colab notebooks and tutorials by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/110
Add tutorials/colab notebooks to readthedocs by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/111
Merge main to dev by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/112
Update readthedocs by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/113
Remove nbsphinx to resolve readthedocs error by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/114
Dev by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/115
Add colab notebooks to readthedocs by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/116
Update readme by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/117

Full Changelog: https://github.com/MouseLand/facemap/compare/v1.0.1...v1.0.2-rc1

v1.0.1

10 months ago

Bug Fixes

Fix np.bool deprecation
Fix dependencies
SVD bug fixes

v1.0.0

1 year ago

What's new?

Pose estimation (pre-trained) model for tracking mouse orofacial movements
Refinement of predicted keypoints for fine-tuning model in GUI
Neural prediction model using keypoints
New logo!

Previous features

The new GUI includes previous Facemap features, such as SVD processing of videos and pupil tracking.

What's Changed

Dev catch up by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/84
Edit scene layout and CLI flags by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/87
Update dev by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/88
New logo and bug fixes by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/91
Adjust frame label by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/92
Fix pose bbox bugs by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/94

Full Changelog: https://github.com/MouseLand/facemap/compare/v1.0.0-rc1...v1.0.0

v1.0.0-rc1

1 year ago

What's new?

Pose estimation (pre-trained) model for tracking mouse orofacial movements
Refinement of predicted keypoints for fine-tuning model in GUI
Neural prediction model using keypoints

Previous features

The new GUI includes previous Facemap features, such as SVD processing of videos and pupil tracking.

What's Changed

Multiview by @carsen-stringer in https://github.com/MouseLand/facemap/pull/1
Origin/dev by @carsen-stringer in https://github.com/MouseLand/facemap/pull/21
opencv implementation and bug fixes by @carsen-stringer in https://github.com/MouseLand/facemap/pull/20
Dev by @carsen-stringer in https://github.com/MouseLand/facemap/pull/22
Clustering, DLC labels and ROI options by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/28
movSVD calculation by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/31
update dev w/ main by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/32
online tests by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/33
Dev by @carsen-stringer in https://github.com/MouseLand/facemap/pull/44
import statements and installation instructions edit by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/48
fix higher sbin process by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/49
Remove pandas and correct batch processing by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/66
Remove pandas by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/74
Fix pose model dropdown menu error by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/77
Fix roi/sigma box issue by @Atika-Syeda in https://github.com/MouseLand/facemap/pull/78

New Contributors

@carsen-stringer made their first contribution in https://github.com/MouseLand/facemap/pull/1
@Atika-Syeda made their first contribution in https://github.com/MouseLand/facemap/pull/28

Full Changelog: https://github.com/MouseLand/facemap/commits/v1.0.0-rc1