EcologicalNetworks.jl Versions Save

Everything you've never dreamed about measuring on ecological networks.

v0.5.2

2 years ago

EcologicalNetworks v0.5.2

Diff since v0.5.1

Closed issues:

  • Calculating trophic levels (#202)

Merged pull requests:

  • Trophic bugfixes (#204) (@mjsmith037)
  • Fix trophic level (#206) (@tpoisot)

v0.5.1

2 years ago

EcologicalNetworks v0.5.1

Diff since v0.5.0

Closed issues:

  • return order of node metrics (#192)
  • Base.contains and Base.in overload for determining if a species is in a network (#196)
  • Implementation of ρ_ska normalization is incorrect when providing undirected (mirrored) networks (#203)

Merged pull requests:

  • ✏fix equations information docs (#195) (@MichielStock)
  • Spectral radius bug fix (#205) (@tpoisot)

v0.5.0

2 years ago

EcologicalNetworks v0.5.0

Diff since v0.4.3

Merged pull requests:

  • Information theory (#190) (@MichielStock)
  • update version for CI (#193) (@tpoisot)

v0.4.3

3 years ago

EcologicalNetworks v0.4.3

Diff since v0.4.2

Closed issues:

  • The linearfilter documentation should specify which value of alpha does what (#160)
  • JOSS: Slight clarification of installation instructions (#167)
  • JOSS: Textual edits to paper (#168)

Merged pull requests:

  • Improved performance of function lp (#188) (@Inazuma110)

v0.4.2

3 years ago

EcologicalNetworks v0.4.2

Diff since v0.4.1

Closed issues:

  • Modularity for bipartite networks (#187)

Merged pull requests:

  • Memory saving for Q (#186) (@Inazuma110)

v0.4.1

3 years ago

EcologicalNetworks v0.4.1

Diff since v0.4.0

Merged pull requests:

  • RDPG src and docs (#150) (@gvdr)
  • update Mangal integration example (#182) (@FrancisBanville)
  • start adding community detection functions (#183) (@tpoisot)
  • Some performance improvements (#184) (@tpoisot)
  • RDPG (#185) (@tpoisot)

v0.4.0

3 years ago

EcologicalNetworks v0.4.0

Diff since v0.3.1

Closed issues:

  • Need an A method to get the adjacency matrix (#180)
  • Centrality measures (#181)

Merged pull requests:

  • Replace the dense network by a sparse array (#179) (@tpoisot)

v0.3.1

3 years ago

EcologicalNetworks v0.3.1

Diff since v0.3.0

Closed issues:

  • Negative modularity when species cannot interact with themselves (#161)
  • Functional role should not be NaN (#162)
  • JOSS: Does authorship match contributions? (#166)
  • JOSS: EcoJulia link doesn't work. (#170)
  • JOSS: Include code example in docs (#171)

Merged pull requests:

  • CompatHelper: bump compat for "DataStructures" to "0.18" (#163) (@github-actions[bot])
  • JOSS paper (#164) (@FrancisBanville)
  • CompatHelper: bump compat for "Distributions" to "0.24" (#165) (@github-actions[bot])
  • Address review comments (#169) (@FrancisBanville)
  • Example use case (#172) (@FrancisBanville)
  • Avoids returning NaN in functional roles (#173) (@tpoisot)
  • add DataFrames and Plots to doc dependencies (#174) (@FrancisBanville)
  • Additional examples (#175) (@tpoisot)
  • fix example use case (#176) (@FrancisBanville)

v0.3.0

4 years ago

EcologicalNetworks v0.3.0

Diff since v0.2.2

Merged pull requests:

  • Install TagBot as a GitHub Action (#151) (@JuliaTagBot)
  • Update develop with master (#152) (@tpoisot)
  • Prepare for new release (#153) (@tpoisot)
  • CompatHelper: add new compat entry for "Distributions" at version "0.23" (#154) (@github-actions[bot])
  • CompatHelper: add new compat entry for "StatsBase" at version "0.33" (#155) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Combinatorics" at version "1.0" (#156) (@github-actions[bot])
  • CompatHelper: add new compat entry for "Requires" at version "1.0" (#157) (@github-actions[bot])
  • CompatHelper: add new compat entry for "DataStructures" at version "0.17" (#158) (@github-actions[bot])

v0.2.2

4 years ago

v0.2.2 (2019-10-17)

Diff since v0.2.1

Closed issues:

  • Spectral radius (#147)
  • Document the djikstra function (#146)
  • Info about upcoming removal of packages in the General registry (#145)
  • V 0.2.0 (#141)

Merged pull requests:

  • Feature spectral radius (#148) (tpoisot)
  • Update README.md (#143) (tpoisot)