DiffEqBayes.jl Versions Save

Extension functionality which uses Stan.jl, DynamicHMC.jl, and Turing.jl to estimate the parameters to differential equations and perform Bayesian probabilistic scientific machine learning

v3.6.1

4 months ago

DiffEqBayes v3.6.1

Diff since v3.6.0

Merged pull requests:

  • Bump actions/checkout from 3 to 4 (#310) (@dependabot[bot])
  • typos CI (#314) (@ArnoStrouwen)
  • Bump actions/checkout from 3 to 4 (#315) (@dependabot[bot])
  • CompatHelper: bump compat for RecursiveArrayTools to 3, (keep existing compat) (#316) (@github-actions[bot])
  • CompatHelper: bump compat for RecursiveArrayTools to 3 for package docs, (keep existing compat) (#317) (@github-actions[bot])
  • CompatHelper: bump compat for Turing to 0.30, (keep existing compat) (#318) (@github-actions[bot])

v3.6.0

9 months ago

DiffEqBayes v3.6.0

Diff since v3.5.0

Merged pull requests:

  • CompatHelper: bump compat for Turing to 0.28, (keep existing compat) (#309) (@github-actions[bot])

v3.5.0

10 months ago

DiffEqBayes v3.5.0

Diff since v3.4.0

Closed issues:

  • Support for sampling from multiple chains is missing from turing_inference (#306)

Merged pull requests:

  • CompatHelper: bump compat for StanSample to 7, (keep existing compat) (#302) (@github-actions[bot])
  • CompatHelper: bump compat for StatsBase to 0.34 for package docs, (keep existing compat) (#303) (@github-actions[bot])
  • Prepare handling of truncated distribution for changes in Distributions (#304) (@devmotion)
  • CompatHelper: bump compat for Turing to 0.26, (keep existing compat) (#305) (@github-actions[bot])
  • Added support for sampling from multiple chain using Turing.jl (#307) (@saumil-sh)

v3.4.0

1 year ago

DiffEqBayes v3.4.0

Diff since v3.3.1

Closed issues:

  • Turing inference BoundsError when save_idxs is single value (#235)

Merged pull requests:

  • [skip ci] LanguageTool (#291) (@ArnoStrouwen)
  • format markdown (#293) (@ArnoStrouwen)
  • enable dependabot for GitHub actions (#296) (@ranocha)
  • Bump codecov/codecov-action from 1 to 3 (#297) (@dependabot[bot])
  • Bump actions/checkout from 1 to 3 (#298) (@dependabot[bot])
  • Bump actions/cache from 1 to 3 (#299) (@dependabot[bot])
  • Test a few version bumps (#301) (@ChrisRackauckas)

v3.3.1

1 year ago

DiffEqBayes v3.3.1

Diff since v3.3.0

Merged pull requests:

  • Include pendulum.md in examples (#275) (@Vaibhavdixit02)
  • CompatHelper: add new compat entry for Plots at version 1 for package docs, (keep existing compat) (#277) (@github-actions[bot])
  • CompatHelper: add new compat entry for StatsPlots at version 0.15 for package docs, (keep existing compat) (#278) (@github-actions[bot])
  • CompatHelper: add new compat entry for BenchmarkTools at version 1 for package docs, (keep existing compat) (#279) (@github-actions[bot])
  • CompatHelper: add new compat entry for DynamicHMC at version 3 for package docs, (keep existing compat) (#280) (@github-actions[bot])
  • CompatHelper: add new compat entry for TransformVariables at version 0.7 for package docs, (keep existing compat) (#281) (@github-actions[bot])
  • CompatHelper: add new compat entry for OrdinaryDiffEq at version 6 for package docs, (keep existing compat) (#282) (@github-actions[bot])
  • CompatHelper: add new compat entry for Distributions at version 0.25 for package docs, (keep existing compat) (#283) (@github-actions[bot])
  • CompatHelper: add new compat entry for ParameterizedFunctions at version 5 for package docs, (keep existing compat) (#284) (@github-actions[bot])
  • CompatHelper: add new compat entry for StatsBase at version 0.33 for package docs, (keep existing compat) (#285) (@github-actions[bot])
  • CompatHelper: add new compat entry for RecursiveArrayTools at version 2 for package docs, (keep existing compat) (#286) (@github-actions[bot])
  • CompatHelper: add new compat entry for DiffEqBayes at version 3 for package docs, (keep existing compat) (#287) (@github-actions[bot])
  • CompatHelper: add new compat entry for CmdStan at version 6 for package docs, (keep existing compat) (#288) (@github-actions[bot])
  • use normal priors in pendulum example, to avoid stepsize bisection intermittent failure (#289) (@Vaibhavdixit02)

v3.3.0

1 year ago

DiffEqBayes v3.3.0

Diff since v3.2.0

Merged pull requests:

  • Build doc examples as strict (#274) (@ChrisRackauckas)

v3.2.0

1 year ago

DiffEqBayes v3.2.0

Diff since v3.1.0

Closed issues:

  • Duplicate using statement and formatting (#261)
  • need second order ode example (#266)

Merged pull requests:

  • Feature/using-refactor (#262) (@AP6YC)
  • Revert "Feature/using-refactor" (#263) (@Vaibhavdixit02)
  • Title SEO (#264) (@ArnoStrouwen)
  • canonify docs (#267) (@ArnoStrouwen)
  • reproducible docs (#268) (@ArnoStrouwen)
  • Bump Turing (#272) (@ChrisRackauckas)
  • Keep LDP at 1 (#273) (@ChrisRackauckas)

v3.1.0

1 year ago

DiffEqBayes v3.1.0

Diff since v3.0.1

Merged pull requests:

  • Update compat entries of LogDensityProblems and TransformVariables (#260) (@devmotion)

v3.0.1

1 year ago

DiffEqBayes v3.0.1

Diff since v3.0.0

Merged pull requests:

  • format SciML style (#249) (@ChrisRackauckas)
  • badges (#253) (@ArnoStrouwen)
  • doc cov (#254) (@ArnoStrouwen)
  • MassInstallAction: Install the Invalidations workflow on this repository (#257) (@devmotion)
  • add delta key word (#258) (@EvoArt)
  • Account for changes in DynamicHMC 3.3.0 (#259) (@devmotion)

v3.0.0

1 year ago

DiffEqBayes v3.0.0

Diff since v2.26.0

Merged pull requests:

  • CompatHelper: bump compat for "Turing" to "0.17" (#221) (@github-actions[bot])
  • CompatHelper: bump compat for "ModelingToolkit" to "6" (#222) (@github-actions[bot])
  • Revert "CompatHelper: bump compat for "ModelingToolkit" to "6"" (#223) (@Vaibhavdixit02)
  • CompatHelper: bump compat for "StanSample" to "4" (#224) (@github-actions[bot])
  • CompatHelper: bump compat for StructArrays to 0.6, (keep existing compat) (#227) (@github-actions[bot])
  • CompatHelper: bump compat for LogDensityProblems to 0.11, (keep existing compat) (#229) (@github-actions[bot])
  • CompatHelper: bump compat for ModelingToolkit to 6, (keep existing compat) (#231) (@github-actions[bot])
  • CI for LTS (#234) (@ChrisRackauckas)
  • Bump versions and some deprecations updates (#244) (@Vaibhavdixit02)