Dcm2Bids Versions Save

Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure

3.1.1

7 months ago

Here is the newest release of dcm2bids ! 🎉 🥳

No new feature but two useful fixes ! Hope you like this new feature less buggy :no_entry: :bug:

Arnaud and Sam

What's Changed

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/3.1.0...3.1.1

3.1.0

8 months ago

We are excited to announce the newest release of dcm2bids ! :tada: :partying_face:

This update introduces some new features, improvements, and bug fixes to enhance your DICOM to BIDS conversion experience. Everything embedded into this version comes from the community :heart:. Here are few examples.

  • During OHBM we've been asked to support archives as a dicom input, it's part of Dcm2bids 3.1.0. Check dcm2bids --help output. link
  • While helping people on Neurostars, @smeisler indicates that he needed to run pydeface after dcm2bids conversion since he needed both versions before and after defacing, it's now part of Dcm2bids 3.1.0. Check custom_entities in post-op section. link
  • If you want to speed up dcm2bids conversion @SamGuay wrote a really nice tutorial to convert your data faster than ever.

Your questions and concerns remain our top priority and continue to shape the future of Dcm2bids!

Thank you Arnaud and Sam

We would like to thank @smeisler, @Remi-Gau, @raniaezzo, @arokem and the users from neurostars for their feedbacks.

What's Changed

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/3.0.2...3.1.0

3.0.2

8 months ago

First of all thank you to everybody who came see our poster during OHBM 2023 in Montreal !

We listened to you and we added an option to reorganize your NIFTIs into a BIDS structure. Check this link. We also extended the possibilities provided by the item sidecar_changes.

Congrats :partying_face:

What's Changed

New Contributors

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/3.0.1...3.0.2

3.0.1

9 months ago

We could not be more proud of the 3.0.1 dcm2bids release :blush: . We put everything we've learned from our past experiences and listen to all our users' ideas into this version.

Advanced searching criterias such as extractors combined with custom entities, the ability to compare floats or the auto_extract_entities option directly accessible from dcm2bids command will make the conversion to BIDS smoother than ever and significantly reduce the complexity and the length of your configuration file especially for multi-site acquisitions.

We highly encourage you to dive into the documentation since we added quite a lot of new features.

Please don't hesitate to give us your feedback using this https://github.com/UNFmontreal/Dcm2Bids/discussions/240.

Thank you again for all our users who contributed in some ways to this release. Thank you @SamGuay for the long discussions and late debug sessions. :tada:

Arnaud

What's Changed

New Contributors

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/2.1.9...3.0.1

3.0.0rc1

10 months ago

Ok let's be clear after working very hard on this we are definitively biased so we decided to ask ChatGPT to write for us a short fun description for our brand new version.

Introducing the latest version of dcm2bids: the superhero of medical imaging data conversion! With simplified configuration, enhanced DICOM handling, comprehensive data validation, advanced options, and amazing new features, dcm2bids will transform your data into BIDS format like magic. Join the fun and unleash your scientific superpowers today!

Please check the documentation :tada:

:warning: This is a release candidate.

What's Changed

New Contributors

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/2.1.8...3.0.0rc1

2.1.9

1 year ago

I had some issues with pypi. Sorry for this.

What's Changed

New Contributors

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/2.1.7...2.1.9

2.1.8

1 year ago

This will be our last PR before moving to a new API.

What's Changed

New Contributors

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/2.1.7...2.1.8

2.1.7

1 year ago

Thank you to everyone who was involved in this release.

Last time I said "more to come soon" this time I won't commit to anything.

BUT we already have plan to make a major break release jumping directly to 3.0.0 and add more flexibility to the searchMethod.

See you soon with a new release :laughing:

What's Changed

New Contributors

Full Changelog: https://github.com/UNFmontreal/Dcm2Bids/compare/2.1.6...2.1.7

2.1.6

3 years ago

Welcome 2.1.6 !!

Brand new documentation !!!

Discussions are now open. Come introduce yourself :+1:

You can install dcm2bids using conda. :confetti_ball:

Thank you to everyone who was involved in this release. More to come soon!

2.1.6rc1

3 years ago

First time with the new package system

  • New Containers
  • Fix pypi package