Covviz Versions Save

Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata

v1.3.3

2 years ago

improves extraction of gene names from gff for the report

v1.3.2

3 years ago

updates exclude to better respect an empty string rather than make the user do -e "/"

v1.3.1

3 years ago

updates some js conditions
updates license info in --help msg

v1.3.0

3 years ago

updates to MIT license
updates navigation to dropdown with typeahead which also allows arrow (←, →) nav
updates data object saved in js; traces built in js rather than python
subsets table when making selections in Global QC

v1.2.2

4 years ago

fixes issue with quotes surrounding gene names from Ensembl gffs (thanks @preetida)

v1.2.1

4 years ago

covviz docker container now includes goleft
covviz python code now accounts for inferred sex chroms

v1.2.0

4 years ago

adds export functionality on table
improves responsiveness of table
improves logging message during execution
traces for a sample are consistent across all chromosomes

v1.1.5

4 years ago

fixes behavior of de-selecting table entry when switching chromosomes

v1.1.4

4 years ago

updates the vcf track to add a white outline to more clearly show a break between overlapping variants at particular zoom levels

v1.1.2

4 years ago

fixes issue of displaying ROC curves when chromosomes are prefixed with 'chr'