Connected Components 3d Versions Save

Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

3.4.0

2 years ago

You can now use cc3d on continuously valued raw data images to get a rough segmentation using the delta argument.

I also added float/double support for both discrete and continuous value operations.

3.2.1

2 years ago

Citeable release on Zenodo which includes several features:

  • Multi-Label CCL
  • Use of Row Foreground Transitions (RFT) to reduce memory usage.
  • Foreground row finding pass for accelerating sparse objects.
  • 26, 18, and 6 connected modes.
  • Use of "Phantom Labels"
  • Voxel Connectivity Graph generator.
  • Region Graph
  • Accelerated extraction of binary images.