An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!
This update provides a multitude of bug fixes, including the solution for a crash during plotting when it was installed using the Windows installer. Furthermore, one can now easily take a map screenshot under the respective options in the "Map" menu, EFMs can now be easily normalized and scenario-dependent annotations were added (e.g., for scenario-dependent variances or thermodynamic parameter values).
There are 4 alternative ways to install CNApy:
If you have questions or suggestions regarding CNApy, you can use either of the CNApy GitHub issues, the CNApy GitHub discussions or the CNApy Gitter chat room.
Full Changelog: https://github.com/cnapy-org/CNApy/compare/v1.1.10...v1.1.11
Important note for those who are using the cnapy-dev Anaconda environment: Since CNApy's Anaconda environment requirements are changed with this release, it is recommended to create CNApy's Anaconda enviroment again, e.g. by deleting the old environment and creating a new one.
This update provides a multitude of bug fixes and several small enhancements such as an improved Compute MCS dialog with a reaction auto-completion and the ability to use the "-" sign.
There are 4 alternative ways to install CNApy:
If you have questions or suggestions regarding CNApy, you can use either of the CNApy GitHub issues, the CNApy GitHub discussions or the CNApy Gitter chat room.
Full Changelog: https://github.com/cnapy-org/CNApy/compare/v1.1.9...v1.1.10
This update provides a multitude of bug fixes and several small enhancements such as the new "Apply" button for calculated MCS (which directly sets them as a scenario) and the new ability to export an XLSX spreadsheet file with extensive in/out flux data for all metabolites of a model.
There are 4 alternative ways to install CNApy:
If you have questions or suggestions regarding CNApy, you can use either of the CNApy GitHub issues, the CNApy GitHub discussions or the CNApy Gitter chat room.
Full Changelog: https://github.com/cnapy-org/CNApy/compare/v1.1.8...v1.1.9
Important note if you're using the cnapy-dev Anaconda environment: Since CNApy's Anaconda environment requirements are changed with this release, it is recommended to create CNApy's Anaconda enviroment again, e.g. by deleting the old environment and creating a new one.
This updates provides an improved GUI experience including a history of viewed model items, a multitude of bug fixes and now officially supports the new easier way to install CNApy on Windows.
There are 4 alternative ways to install CNApy:
If you have questions or suggestions regarding CNApy, you can use either of the CNApy GitHub issues, the CNApy GitHub discussions or the CNApy Gitter chat room.
Full Changelogs:
Important note if you're using the cnapy-dev Anaconda environment: Since CNApy's Anaconda environment requirements are changed with this release, it is recommended to create CNApy's Anaconda enviroment again, e.g. by deleting the old environment and creating a new one.
This updates provides an improved GUI experience including a history of viewed model items, a multitude of bug fixes and now officially supports the new easier way to install CNApy on Windows.
There are 4 alternative ways to install CNApy:
If you have questions or suggestions regarding CNApy, you can use either of the CNApy GitHub issues, the CNApy GitHub discussions or the CNApy Gitter chat room.
Full Changelog: https://github.com/cnapy-org/CNApy/compare/v1.1.6...v1.1.7
Important note if you're using the cnapy-dev Anaconda environment: Since CNApy's Anaconda environment requirements are changed with this release, it is recommended to create CNApy's Anaconda enviroment again, e.g. by deleting the old environment and creating a new one.
This is a major new release containing many new and novel features, as well as many important bug fixes:
There are three ways to install CNApy:
If you have questions or suggestions regarding CNApy, you can use either of the CNApy GitHub issues, the CNApy GitHub discussions or the CNApy Gitter chat room.
Full Changelog: https://github.com/cnapy-org/CNApy/compare/v1.1.4...v1.1.5 and Full Changelog: https://github.com/cnapy-org/CNApy/compare/v1.1.5...v1.1.6
Important note if you're using the cnapy-dev Anaconda environment: Since CNApy's Anaconda environment requirements are changed with this release, it is recommended to create CNApy's Anaconda enviroment again, e.g. by deleting the old environment and creating a new one.
This is a major new release containing many new and novel features, as well as many important bug fixes:
There are three ways to install CNApy:
If you have questions or suggestions regarding CNApy, you can use either of the CNApy GitHub issues, the CNApy GitHub discussions or the CNApy Gitter chat room.
Full Changelog: https://github.com/cnapy-org/CNApy/compare/v1.1.4...v1.1.5
CNApy has got a Gitter chat room where you can talk to CNApy's developers and stay informed about new releases
This is primarily a maintenance release with some new small features and many bug fixes.
There are three ways to install CNApy:
CNApy has got a new Gitter chat room where you can talk to CNApy's developers and stay informed about new releases
There are three ways to install CNApy:
Beta release