Broadinstitute Tangram Versions Save

Spatial alignment of single cell transcriptomic data.

1.0.4

1 year ago
  • Typo fix in Readme
  • Fix count_cell_annotations in utils.py to avoid key error when mapping in cells and cluster modes.

1.0.3

1 year ago
  • README typos fixed
  • Bug Fix: Removed default value for scale factor from plotting functions
  • Updated tutorial accordingly

1.0.2

2 years ago
  • Updated links to tutorials
  • Included link to documentation
  • Other minor changes to instructions in ReadMe

1.0.1

2 years ago

Easy installation instructions Updates to scanpy based plotting functions to accommodate data from most spatial techniques Updates to the tangram tutorial with scanpy based plotting functions

1.0.0

2 years ago
  • Integrate Tangram with Squidpy (based on Squidpy 1.1.0)
  • Scanpy style plotting
  • New tutorial for integration with Squidpy

0.4.0

2 years ago

loaded training data in place improved cross validation performance changed/added functions for integration with Squidpy updated tutorials accordingly

0.3.0

3 years ago
  • Improved visualization API for analysis.
  • Added leave-one-out strategy.
  • Updated tutorial accordingly.

0.2.1

3 years ago
  • Typos fixed.
  • PyPI installer.

v0.2.0

3 years ago

Simplified loss function and user interface for mapping diagnosis,