BIDScoin converts your source-level neuroimaging data to BIDS
This is a hotfix release for v4.3.1, which was just released but was giving undesired results after changing the data type in the bidseditor. Apart from the fix in this release (see Github issue https://github.com/Donders-Institute/bidscoin/issues/229 for full explanation) nothing else has changed
This release contains a bug that can yield undesired output, please upgrade to 4.3.2
--------------- original notes ------------------ Here is a minor and safe BIDScoin upgrade, with fixes and two new features:
Enjoy!
With this major release, BIDScoin became more robust and solid than ever before, while gaining several new features that add to its flexibility and user-friendliness. Amongst others, the major new highlights are:
--cluster
option for running bidscoiner in parallel on a (DRMAA enabled) HPCbidsmap_bids2bids
template bidsmap for nibabel2bids to edit existing BIDS datasets
<<session>>
, <<dir>>
and <<PhaseEncodingDirection>>
bidscoiner.tsv
log-file for easier tracking of file conversions / data provenanceFor more details see the changelog
A bugfix release with some additions
skullstrip
and slicereport
bidsappsbidsignore
fieldGreetings, sentient beings of the digital cosmos! It is with great pleasure that we announce the release of BIDScoin version 4.2.0. This release, like the Ultimate Answer itself, brings a sense of fulfillment and excitement to the table. So grab your towel, don your favorite bathrobe, and let's dive headfirst into the infinite improbability of BIDScoin!
bidscoin --show
).extras
[home]/.bidscoin/[version]/templates
, i.e. in the user settings folderGo and explore BIDScoin 4.2.0 with the same sense of wonder and absurdity that you approach the rest of the universe :slightly_smiling_face:
Here's some good and some bad news. The bad news is there were a few glitches in BIDScoin 4.1.0, but the good news is that they are fixed in the new BIDScoin 4.1.1 release :slightly_smiling_face:
The fixes in this new release are:
<<>>
Most notable changes for this release:
<<>>
dynamic run-index (default), that behaves the same as <<1>>
when multiple runs are acquired, otherwise it is omitted/void (PR #195)With a lot of important improvements that should make your (and my) life significantly easier :-). The most notable changes are:
skullstrip
tool (a bids-wrapper around FreeSurfer/synthstrip)slicereport
QC tool (a bids-wrapper around FSL/slicesdir)bidscoin -b / -t
--unzip
option in the bidsmapperdatatypes
option from the bidsmapparticipants
option from bidscoinerEnjoy!
.bidsignore
datatypes-l n
to the dcm2niix arguments to revert old UIN16 -> INT16 behaviour (otherwise fmriprep outputs are twice as large).bidsignore
datatypes*
and ?
wildcards in the sub/ses prefixes in the bidsmapper