AllenSDK Versions Save

What's Changed

• ticket/PSB-260: Bug fix to VBN by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2731
• Rc/2.16.2 by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2738

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.16.1...v2.16.2

What's Changed

• rc/2.16.1 by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2735

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.16.0...v2.16.1

What's Changed

• Ticket/psb-171: Various fixes for VBO release by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2707
• Update Dependency Compatibility by @mikejhuang in https://github.com/AllenInstitute/AllenSDK/pull/2716
• Ticket/PSB-167: Add quality to metadata table by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2712
• ticket/PSB155: Add is_sham_change column. by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2715
• Fix for namespaces issue by @brendanjohnharris in https://github.com/AllenInstitute/AllenSDK/pull/2714
• unpin hdmf and pynwb by @mikejhuang in https://github.com/AllenInstitute/AllenSDK/pull/2720
• ticket/PSB-200: Clean up rc/2.16.0 by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2721
• ticket/PSB-227: Revert to json for vbn packaging. by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2723
• Ticket/PSB-235: Fixes needed for data release by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2724
• Ticket/PSB-207: by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2726
• ticket/PSB-257: Investigate AllenSDK test failure for python3.9 by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2729
• Ticket/PSB-249: Address comments on final release candidate. by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2728
• Ticket/PSB-7 by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2730
• Rc/2.16.0 by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2722

New Contributors

• @brendanjohnharris made their first contribution in https://github.com/AllenInstitute/AllenSDK/pull/2714

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.15.2...v2.16.0

What's Changed

• update VBO read the docs page by @matchings in https://github.com/AllenInstitute/AllenSDK/pull/2660
• fixes issue with loading trials from BehaviorEcephysSession.from_nwb by @aamster in https://github.com/AllenInstitute/AllenSDK/pull/2701
• ticket/PSB-134: Unpin statsmodels by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2699
• ticket/PSB-173: Create allensdk_anaconda3 image in Pika dockerhub. Modify Bamboo script by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2708

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.15.1...v2.15.2

What's Changed

• rc/2.15.1: HOTFIX by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2652

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.15.0...v2.15.1

What's Changed

• Remove to_json from data objects and their associated tests by @mikejhuang in https://github.com/AllenInstitute/AllenSDK/pull/2626
• Modify write nwb methods to instantiate objects using from_lims by @mikejhuang in https://github.com/AllenInstitute/AllenSDK/pull/2624
• Vco eye tracking by @aamster in https://github.com/AllenInstitute/AllenSDK/pull/2639
• Ticket-2541: Add project code to several locations. by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2623
• ticket:PSB-19: Fixup typing by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2642
• Vbn lfp behavior tutorials by @corbennett in https://github.com/AllenInstitute/AllenSDK/pull/2640
• Update Data changes for VBN. by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2649
• Add targeted_imaging_depth column to get_ophys_experiment_table by @mikejhuang in https://github.com/AllenInstitute/AllenSDK/pull/2648
• ticket/PSB-24: Modify Age data_object to calculate mouse age at the date of aquisition of session. by @morriscb in https://github.com/AllenInstitute/AllenSDK/pull/2644

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.14.1...v2.15.0

What's Changed

• Fix issues with notebooks by @aamster in https://github.com/AllenInstitute/AllenSDK/pull/2635

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.14.0...v2.14.1

• Support for updated vbn release containing probe, lfp and behavior only data.
• Updates to Ophys data in anticipation of a forthcoming updated data release
• Various notebook updates
• Python 3.9 support
• Various bug fixes and quality of life improvements.

What's Changed

• Fixes dataframe indices by @aamster in https://github.com/AllenInstitute/AllenSDK/pull/2580

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.13.7...v2.13.8

What's Changed

• Update vbn notebooks by @corbennett in https://github.com/AllenInstitute/AllenSDK/pull/2523
• Update vbn quality metrics tutorial by @corbennett in https://github.com/AllenInstitute/AllenSDK/pull/2528
• Fix bug because LIMS is passing old version of stimulus presentations table to current source density module https://github.com/AllenInstitute/AllenSDK/commit/0223f6d8c8a6fb62ca732a7fca180a1d189a3dd1

New Contributors

• @corbennett made their first contribution in https://github.com/AllenInstitute/AllenSDK/pull/2523

Full Changelog: https://github.com/AllenInstitute/AllenSDK/compare/v2.13.6...v2.13.7