A collection of scripts and notes related to genomics and bioinformatics
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, ...
Graph realignment tools for structural variants
machine learning for genomic variants
Learning the Variant Call Format
Bayesian genotyper for structural variants
VCF-kit: Assorted utilities for the variant call format
A handy variant calling pipeline generator for whole-genome sequencing (...
A not so forgiving vCard / vcf parser
Program for estimating πN/πS, dN/dS, and other diversity measures from n...
A standalone and free application to explore genetics variations from VC...
convert your 23andme raw file to VCF | DEPRECATED, please see https://gi...
tools for reading, writing, merging, and remapping SNPs
A DNA Sequence Alignment/Map (SAM) library for Clojure
Python 3 library with good support for both reading and writing VCF