Bayesian haplotype-based mutation calling
zUMIs: A fast and flexible pipeline to process RNA sequencing data with ...
Single cell perturbation prediction
R/shiny interface for interactive visualization of data in SummarizedExp...
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequ...
R package for analyzing and interactively exploring large-scale single-c...
R package for analyzing single-cell RNA-seq data
A single-cell RNAseq pipeline for 10X genomics data
Color blindness friendly visualization of single-cell and bulk RNA-seque...
R package with collection of functions created and/or curated to aid in ...
Collection of public scRNA-Seq datasets used by our group
EcoTyper is a machine learning framework for large-scale identification ...
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing sin...
Haplotype-aware CNV analysis from single-cell RNA-seq
Seurat meets tidyverse. The best of both worlds.