COBRApy is a package for constraint-based modeling of metabolic networks.
INDRA (Integrated Network and Dynamical Reasoning Assembler) is an autom...
memote – the genome-scale metabolic model test suite
Advanced Multilanguage Interface to CVODES and IDAS
PEtab - an SBML and TSV based data format for parameter estimation probl...
A web application to visualize and edit pathway models
An integrated visual environment for metabolic modeling with common meth...
JSBML is a community-driven project to create a free, open-source, pure ...
Documentation, models and code relating to the 3rd edition of the textbo...