Scripts to download genomes from the NCBI FTP servers
🧬 gget enables efficient querying of genomic reference databases
genes and genomes at your fingertips
NCBI Datasets is a new resource that lets you easily gather data from ac...
Bash script to download/update snapshots of files from NCBI genomes repo...
🐞 Convert NCBI taxonomy dump into lineages
dbSNP
ganon2 classifies genomic sequences against large sets of references eff...
simplified searching, fetching, and parsing records from NCBI using thei...
VAPiD: Viral Annotation and Identification Pipeline
:hatching_chick: locally query the ncbi taxonomy
Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAI...
R mased batch sequence downloader, with primer development and in silico...
This python script detects known traits in raw human genetic data.
Turbocharge a PubMed literature search using citation counts and data fr...