microbiome R package
Build a partitioned pangenome graph from microbial genomes
Identification & characterization of bacterial plasmid-borne contigs fro...
Rapid determination of appropriate reference genomes.
Functions to simplify and standardise antimicrobial resistance (AMR) dat...
An easy-to-use C++ application to count bacterial colonies (i.e. CFU).
Collection of commonly used RDP Tools for easy building
A pipeline to select optimal markers for microbial phylogenomics and spe...
Collection of scripts for bacterial genomics
Metagenomic pipeline and other general scripts used in the lab.
📜 the Great Automatic Nomenclator — The Next Million Names for Archaea ...
creating hybrid-gene phylogenetic trees for diversity analyses