Structural variant and indel caller for mapped sequencing data
Strelka2 germline and somatic small variant caller
Personal Cancer Genome Reporter (PCGR)
Structural variation and indel detection by local assembly
Microassembly based somatic variant caller for NGS data
ABRA2
A method for variant graph genotyping based on exact alignment of k-mers
The Platinum Genomes Truthset
ClairS - a deep-learning method for long-read somatic small variant calling
Generic human DNA variant annotation pipeline
Simultaneous detection of SNPs and Indels using a 16-genotype probabilis...