R toolkit for single cell genomics
Deep probabilistic analysis of single-cell and spatial omics data
Reference mapping for single-cell genomics
starfish: unified pipelines for image-based transcriptomics
R/shiny interface for interactive visualization of data in SummarizedExp...
A tool for the unsupervised clustering of cells from single cell RNA-Seq...
A tool for unsupervised projection of single cell RNA-seq data
This contains the dataset for comparing scRNA-seq analysis methods
Clone of the Bioconductor repository for the SingleCellExperiment packag...
Rails/Docker application for the Broad Institute's single cell RNA-seq d...
Clone of the Bioconductor repository for the DropletUtils package.
Bayesian MCMC matrix factorization algorithm
Tutorials, workflows, and convenience scripts for Single Cell Portal
Clone of the Bioconductor repository for the scran package.
A deep learning-based tool for alignment and integration of single cell ...