Opengrok Versions Save

• fix install of opengrok-tools in Docker image

• fixes Annotation view regression from 1.12.24

• avoid annotations for binary files
• use upper limit for output data in Command (Python tooling)
• various Sonar cleanups
• convert Python package to one without setup.py

NOTE: there is a regression when displaying annotations - leads to null pointer exception

• fix NPE when displaying a diff

• skip inactive history entries when generating diff links

Note there is a regression when displaying diffs: https://github.com/oracle/opengrok/issues/4468

• better check of opengrok-sync configuration
• History cache creation/update failures are now acted upon. If the operation fails for a repository, then the 2nd phase of indexing will not happen. If projects are enabled, then given project will not be indexed, otherwise 2nd phase of indexing will be skipped altogether.
  • To suppress the new behavior, one can use the --ignoreHistoryCacheFailures indexer option.

• refresh the repositories for projects in Docker image for each sync run

• JFlex update

• ChronicleMap and JSTL update
  • no impact on functionality

• Lucene 9.8.0
  • no reindex from scratch needed
• JDK 17 support
  • the target byte code is still Java 11
• do not take IOExceptions too seriously during index check
  • avoids wiping out the data root in the Docker image if the check fails due to files not being accessible, permission problem, etc.