TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.
Installation works as usual:
conda create -n tracking -c main -c conda-forge -c trexing trex # linux
conda create -n tracking -c trexing trex # other
Network architecture has been changed/layers with the same function replace old ones. This means that loading old network weights might not work.
When using old-layout network weights, simply create a conda environment with an old TRex:
conda create -n tracking -c main -c conda-forge -c trexing trex==1.0.10 # linux
conda create -n tracking -c trexing trex==1.0.10 # other
I have not tested upgrading an old conda environment to this version, so I recommend creating a new environment.
See https://github.com/mooch443/trex/pull/9#issue-579703919 for details.
Fixed some issues, added more options for recognition (recognition_segment_add_factor) to allow better identification settings for smaller groups.
Adding MKV container format to valid formats. Allowing Anaconda to use any FFMPEG version (especially newer ones) during compilation.
Fixing various display issues, updating menus and documentation. Added a branch on Anaconda for PCs without NVIDIA GPU, as well as compilation that is not specific to Haswell capable processors.
Fixing a few issues that came up immediately after publishing. This repository is currently updated quite frequently, so be sure to check a new version out before reporting errors!
Fixing some initial issues running conda