ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Or, pip install bdgenomics.adam
, which will install both the ADAM binaries and the ADAM Python library.
Additionally, the bdgenomics.adam R bindings are attached to this tag as bdgenomics.adam_0.30.0.tar.gz
. We plan to release bdgenomics.adam to CRAN in a future release, and are tracking the progress of this at issue 1851.
To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Or, pip install bdgenomics.adam
, which will install both the ADAM binaries and the ADAM Python library.
Additionally, the bdgenomics.adam R bindings are attached to this tag as bdgenomics.adam_0.29.0.tar.gz
. We plan to release bdgenomics.adam to CRAN in a future release, and are tracking the progress of this at issue 1851.
To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Or, pip install bdgenomics.adam
, which will install both the ADAM binaries and the ADAM Python library.
Additionally, the bdgenomics.adam R bindings are attached to this tag as bdgenomics.adam_0.28.0.tar.gz
. We plan to release bdgenomics.adam to CRAN in a future release, and are tracking the progress of this at issue 1851.
To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Note: To workaround some dependency conflict issues with the Spark 2.4.3 Scala 2.12 binary distribution and Hadoop, find installation hints in our Jenkins test
https://github.com/bigdatagenomics/adam/blob/master/scripts/jenkins-test#L155
To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Or, pip install bdgenomics.adam
, which will install both the ADAM binaries and the ADAM Python library.
Additionally, the bdgenomics.adam R bindings are attached to this tag as bdgenomics.adam_0.27.0.tar.gz
. We plan to release bdgenomics.adam to CRAN in a future release, and are tracking the progress of this at issue 1851.
To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Note: To workaround some dependency conflict issues with the Spark 2.4.3 Scala 2.12 binary distribution and Hadoop, find installation hints in our Jenkins test
https://github.com/bigdatagenomics/adam/blob/master/scripts/jenkins-test#L155
To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Or, pip install bdgenomics.adam
, which will install both the ADAM binaries and the ADAM Python library.
Additionally, the bdgenomics.adam R bindings are attached to this tag as bdgenomics.adam_0.26.0.tar.gz
. We plan to release bdgenomics.adam to CRAN in a future release, and are tracking the progress of this at issue 1851.
To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Or, pip install bdgenomics.adam
, which will install both the ADAM binaries and the ADAM Python library. Additionally, the bdgenomics.adam R bindings are attached to this tag as bdgenomics.adam_0.25.0.tar.gz
. We plan to release bdgenomics.adam to CRAN in a future release, and are tracking the progress of this at issue 1851.
To learn more, see the documentation or visit us at http://bdgenomics.org/.
To get started,
adam-submit
, adam-shell
, etc. easy from the command-line.Or, pip install bdgenomics.adam
, which will install both the ADAM binaries and the ADAM Python library. Additionally, the bdgenomics.adam R bindings are attached to this tag as bdgenomics.adam_0.24.0.tar.gz
. We plan to release bdgenomics.adam to CRAN in a future release, and are tracking the progress of this at issue 1851.
To learn more, see the documentation or visit us at http://bdgenomics.org/.