RNAseq analysis notes from Ming Tang
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with...
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification f...
Tools to process and analyze deep sequencing data.
Near-optimal RNA-Seq quantification
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
NicheNet: predict active ligand-target links between interacting cells
An overview of algorithms for estimating pseudotime in single-cell RNA-s...
A repository for setting up a RNAseq workflow
Customizable workflows based on snakemake and python for the analysis of...
MiXCR is an ultimate software platform for analysis of Next-Generation S...
RNA-seq workflow using STAR and DESeq2
Differential analysis of RNA-Seq
Table of software for the analysis of single-cell RNA-seq data.
zUMIs: A fast and flexible pipeline to process RNA sequencing data with ...