OpenWorm Versions Save

What's Changed

• CI to development by @pgleeson in https://github.com/openworm/OpenWorm/pull/318
• Test Austin updates by @pgleeson in https://github.com/openworm/OpenWorm/pull/335
• Add docker pull test - no build by @pgleeson in https://github.com/openworm/OpenWorm/pull/337
• Remove JNML_HOME; test pulling image from dockerhub by @pgleeson in https://github.com/openworm/OpenWorm/pull/333
• Release 0.9.4 - uses latest sibernetic and c302, tested with both Intel and AMD drivers by @pgleeson in https://github.com/openworm/OpenWorm/pull/338

Full Changelog: https://github.com/openworm/OpenWorm/compare/0.9.3...0.9.4

What's Changed

• Test with owmeta by @pgleeson in https://github.com/openworm/OpenWorm/pull/326
• Restructure to make versioning easier by @pgleeson in https://github.com/openworm/OpenWorm/pull/325
• Release 0.9.3 by @pgleeson in https://github.com/openworm/OpenWorm/pull/327
• Updated sibernetic branch by @pgleeson in https://github.com/openworm/OpenWorm/pull/328

Full Changelog: https://github.com/openworm/OpenWorm/compare/0.9.2...0.9.3

0.9.2 Dockerfile release Latest

Dockerfile has been updated to use the Python 3 version by default. Recent releases of Sibernetic, c302 and a stable release of PyOpenWorm have been used.

Issues addressed in this release: https://github.com/openworm/OpenWorm/milestone/34

Thanks to @noahbliss @lungd @mstachowsky @cheelee @clausagerskov @mwatts15 and many others for help with updates/testing.

Dockerfile updated to work with latest development versions of Sibernetic, c302 and a stable release of PyOpenWorm. Works now on Windows also.

Issues addressed in this release: https://github.com/openworm/OpenWorm/milestone/33

Thanks to @lungd @clausagerskov @slarson @cheelee @ThatMelon @kdiudenko @mwatts15 and many others.

Issues closed in this release can be found here

• Added variable to allow extending duration of the simulation
• Cleaned up readme
• Simplified run to ./run.sh

Thanks to @a-palyanov @skhayrulin @pgleeson @mstachowsky @lungd @balicea @clausagerskov for contributions and review of this release!

Next up: Milestone 0.9!

We have a first cut of a dockerfile that begins to aggregate the disparate OpenWorm repos into a single simulation stack!

In this release:

• Install: NEURON, PyOpenWorm, c302, sibernetic
• Run: PyOpenWorm+c302+sibernetic+graph movement output
• Output: c302 neuron graphs, sibernetic movie, movement analysis curvature graphs

Huge credit to @lungd and @raminmh for making this possible, in addition to the entire set of OpenWorm contributors (http://openworm.org/people.html).

The docker container has been deployed to https://hub.docker.com/r/openworm/openworm/

See the README.md for more information.