AdmixTools Versions Save

Version 7.0.2 has important bugfixes to qpfstats.

old qpfstats could behave badly when some samples had very low coverage

1. Users of ADMIXTOOLS should know that an alternate version in R (native mode -- reimplementation) written by Robert Maier is also available on Github.
   See https://github.com/uqrmaie1/admixtools Executables run fast, and it has features not available in this C version, such as interactive exploration of graph phylogenies

2. Version 7.0 has numerous upgrades. a) Two new executables --qpfstats qpfmv allow precomputation of f-statistic basis.
   This can greatly reduce computation costs.
   b) qpAdm, qpWave, qpGraph support qpfstats output as input.
   *** This is a much improved way of running with allsnps: YES. *** c) A new experimental feature of qpGraph (halfscore: YES) allows comparison of 2 phylogenies + a (weak) goodness of fit score. Be careful if running with a large nnumber of populations and consider reducing block size say blgsize: .005

Many improvements/bugfixes since earlier release

Some minor bugfixes and an upgrade that Stephan Schiffels asked for

A new parameter "numchrom" is available for rolloff. You can set chromosome number with this parameter.

This is an example: numchrom: 28

This is the first release of the executables of AdmixTools for Linux.